CDS

Accession Number TCMCG016C27172
gbkey CDS
Protein Id OMO53228.1
Location join(13709..13747,13829..13921,14074..14133,14942..14980,15073..15147,15228..15294,15878..15959,17819..17937,18631..18725,18802..18879,18967..19021,19192..19334)
Organism Corchorus capsularis
locus_tag CCACVL1_28787

Protein

Length 314aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01015247.1
Definition 26S proteasome complex ubiquitin receptor, subunit Rpn13 [Corchorus capsularis]
Locus_tag CCACVL1_28787

EGGNOG-MAPPER Annotation

COG_category S
Description 26S proteasome, regulatory subunit
KEGG_TC -
KEGG_Module M00341        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03051        [VIEW IN KEGG]
KEGG_ko ko:K06691        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03050        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map03050        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000502        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005838        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008047        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008541        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010950        [VIEW IN EMBL-EBI]
GO:0010952        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016504        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022624        [VIEW IN EMBL-EBI]
GO:0030162        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0032182        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043130        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043248        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045862        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051345        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0052547        [VIEW IN EMBL-EBI]
GO:0052548        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061133        [VIEW IN EMBL-EBI]
GO:0061134        [VIEW IN EMBL-EBI]
GO:0061135        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070628        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905368        [VIEW IN EMBL-EBI]
GO:1905369        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTTCGTCCTCCGCTGAAGCTTTTCCAGCGATGCAGGAAACTTTGCTGGAGTTTCGTGCTGGTAAAATGTTGTTGGAAGGAAAAAGGGTTCTACCAGATTCTCGTAAAGGACTCGTCCGGATAGCTAGAGGTGAAGAGGGACTGCTACATTTTCTGTGGCTTGATCGCACGCAAAATGTTGTCGAAGATGATCAGATTATTTTTCCTGATGAGGCTGTTTTTGAGAAGGTCAATCAAGCATCTGGTAGGGTCTTCATATTGAAGTTCAATAATGACGACCGGAAGTTCTTTTTCTGGATGCAGGAGCCTAAAGCTGAAGATGACTCACTATTATGTACGGCAGTTAATAATTTGATTAATCAACCATTAGAGTTTCTCGGTGAAGAAGAGCCAGATGCTTCTGCACCTTTGCAAGTGTCTGAAGATATGGTTGAAGATGATATTTCCTCGAGAGCTGGAAATTTGACTGTTCCAAACTTAGGTGCAGAAGCAATAAGTGATGTAACCTCTTCATCAGGGCCAGTTAAATTGGAAGACCTGCAAAGAATATTGAGCAGCATTGGTTCAGGTGGCTTGGGGTTAGGGGACATTTTGAAGCCTGAGTTGATAATGCCATTGATCGAGACATTGCAGTTGGAAGAGCAATTAGCTTCATATTTACCTGAGGGTCAATGGATACCAGAGGATATGTTGGACTTGCTGCAGAGCCCTCCTTTCCGTCAACAAGTAGATTCGTTTACTTATGTACTTCGAACAGGACAGATAGATTTGTCTCAGTTTGGTATTGACCCAAGTAAATACAAGTTCACTGTTTTGTCCTTCCTCGAGGCACTTGAAGATTCTGTTTCCAAAATGTCCGAGTCAGGAGAATCGCGGCAAGATGATAAGGATTTAAGACCTCAGTCATGTAATCAAAACGATCCCATGGATGAGGGCAAGTGA
Protein:  
MGSSSAEAFPAMQETLLEFRAGKMLLEGKRVLPDSRKGLVRIARGEEGLLHFLWLDRTQNVVEDDQIIFPDEAVFEKVNQASGRVFILKFNNDDRKFFFWMQEPKAEDDSLLCTAVNNLINQPLEFLGEEEPDASAPLQVSEDMVEDDISSRAGNLTVPNLGAEAISDVTSSSGPVKLEDLQRILSSIGSGGLGLGDILKPELIMPLIETLQLEEQLASYLPEGQWIPEDMLDLLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSESGESRQDDKDLRPQSCNQNDPMDEGK